PepBDB -- a structural database of biological peptide-mediated interactions

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View the peptide-receptor complex

PDB code: 1A6A
Peptide ID: 1a6a_C
Representation:
Peptide: ball and stick
Protein: cartoon

Download files:
receptor.pdb
peptide.pdb
complex.pdb
binding data

Protein style
Protein color Pure
Rainbow
Peptide style
Peptide color Pure
Rainbow
Action
LIGPLOT of 1a6a_C peptide binding
interaction

interaction

Interacting peptide residues:
C: 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101,

Interacting receptor residues:
A: 9, 11, 22, 24, 31, 32, 43, 49, 50, 51, 52, 53, 54, 55, 58, 59, 61, 62, 65, 66, 68, 69, 72, 73, 76,
B: 9, 11, 13, 26, 28, 30, 38, 47, 56, 57, 60, 61, 67, 70, 71, 74, 77, 78, 81, 82, 85, 86,

Peptide sequence:
>C
PVSKMRMATPLLMQA

Receptor sequence(s):
>A
HVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNYTPITNVPPEVTVLTNSPVELREPNV
LICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDVYDCRVEHWGLDEPLLKHWEF
>B
PRFLEYSTSECHFFNGTERVRYLDRYFHNQEENVRFDSDVGEFRAVTELGRPDAEYWNSQKDLLEQKRGRVDNYCRHNYGVVESFTVQRRVHPKVTVYPS
KTQPLQHHNLLVCSVSGFYPGSIEVRWFRNGQEEKTGVVSTGLIHNGDWTFQTLVMLETVPRSGEVYTCQVEHPSVTSPLTVEWRAR


The pepBDB database is updated monthly. Current version: 2020-03-18
huanglab@hust.edu.cn, Lab of Biophysics and Molecular Modeling