PepBDB -- a structural database of biological peptide-mediated interactions

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View the peptide-receptor complex

PDB code: 1AB9
Peptide ID: 1ab9_D
Representation:
Peptide: ball and stick
Protein: cartoon

Download files:
receptor.pdb
peptide.pdb
complex.pdb
binding data

Protein style
Protein color Pure
Rainbow
Peptide style
Peptide color Pure
Rainbow
Action
LIGPLOT of 1ab9_D peptide binding
interaction

interaction

Interacting peptide residues:
D: 300, 301, 302, 303, 304,

Interacting receptor residues:
B: 57,
C: 172, 175, 189, 190, 191, 192, 193, 194, 195, 213, 214, 215, 216, 217, 218, 219, 220, 226,

Peptide sequence:
>D
TPGVY

Receptor sequence(s):
>B
IVNGEEAVPGSWPWQVSLQDKTGFHFCGGSLINENWVVTAAHCGVTTSDVVVAGEFDQGSSSEKIQKLKIAKVFKNSKYNSLTINNDITLLKLSTAASFS
QTVSAVCLPSASDDFAAGTTCVTTGWGLTRY
>C
NTPDRLQQASLPLLSNTNCKKYWGTKIKDAMICAGASGVSSCMGDSGGPLVCKKNGAWTLVGIVSWGSSTCSTSTPGVYARVTALVNWVQQTLAAN


The pepBDB database is updated monthly. Current version: 2020-03-18
huanglab@hust.edu.cn, Lab of Biophysics and Molecular Modeling