PepBDB -- a structural database of biological peptide-mediated interactions

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View the peptide-receptor complex

PDB code: 1ABI
Peptide ID: 1abi_I
Representation:
Peptide: ball and stick
Protein: cartoon

Download files:
receptor.pdb
peptide.pdb
complex.pdb
binding data

Protein style
Protein color Pure
Rainbow
Peptide style
Peptide color Pure
Rainbow
Action
LIGPLOT of 1abi_I peptide binding
interaction

interaction

Interacting peptide residues:
I: 1, 2, 3, 4, 5, 6, 7, 8, 53, 54, 55, 56, 57, 58, 59, 60, 63, 64,

Interacting receptor residues:
H: 32, 34, 36, 37, 38, 39, 40, 41, 42, 57, 58, 60, 65, 67, 73, 74, 75, 76, 80, 81, 82, 84, 97, 98, 99, 151, 174, 189, 190, 191, 192, 193, 195, 213, 214, 215, 216, 217, 219, 220, 221, 225, 226, 227,

Peptide sequence:
>I
XPXGGGGGNGDXEEIPEEYL

Receptor sequence(s):
>H
IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDI
ALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGG
PFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFGE


The pepBDB database is updated monthly. Current version: 2020-03-18
huanglab@hust.edu.cn, Lab of Biophysics and Molecular Modeling