PepBDB -- a structural database of biological peptide-mediated interactions

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View the peptide-receptor complex

PDB code: 1APM
Peptide ID: 1apm_I
Representation:
Peptide: ball and stick
Protein: cartoon

Download files:
receptor.pdb
peptide.pdb
complex.pdb
binding data

Protein style
Protein color Pure
Rainbow
Peptide style
Peptide color Pure
Rainbow
Action
LIGPLOT of 1apm_I peptide binding
interaction

interaction

Interacting peptide residues:
I: 6, 7, 9, 10, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24,

Interacting receptor residues:
E: 50, 51, 52, 53, 54, 82, 84, 127, 129, 133, 136, 166, 168, 169, 170, 187, 197, 198, 199, 200, 201, 202, 203, 204, 205, 230, 233, 234, 235, 236, 239, 240, 241, 242, 243, 246, 247, 330,

Peptide sequence:
>I
TTYADFIASGRTGRRNAIHD

Receptor sequence(s):
>E
XEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS
FKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEI
ILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRK
VEAPFIPKFKGPGDTSNFDDYEEEEIRVXINEKCGKEFTEF


The pepBDB database is updated monthly. Current version: 2020-03-18
huanglab@hust.edu.cn, Lab of Biophysics and Molecular Modeling