PepBDB -- a structural database of biological peptide-mediated interactions

Huang lab       Home       Browse      Search      Help & example      Download     

View the peptide-receptor complex

PDB code: 1AQC
Peptide ID: 1aqc_C
Representation:
Peptide: ball and stick
Protein: cartoon

Download files:
receptor.pdb
peptide.pdb
complex.pdb
binding data

Protein style
Protein color Pure
Rainbow
Peptide style
Peptide color Pure
Rainbow
Action
LIGPLOT of 1aqc_C peptide binding
interaction

interaction

Interacting peptide residues:
C: 3, 4, 5, 6, 7, 8, 9, 10, 11, 12,

Interacting receptor residues:
A: 346, 347, 348, 353, 354, 413, 414, 415, 416, 417, 418, 419, 420, 421, 431, 456, 458, 472, 473, 476, 479, 482, 483, 486,

Peptide sequence:
>C
GYENPTYKFF

Receptor sequence(s):
>A
XEDLIDGIIFAANYLGSTQLLSDKTPSKNVRXXQAQEAVSRIKXAQKLXTEVDLFILTQRIKVLNADTQETXXDHPLRTISYIADIGNIVVLXARRRYKX
ICHVFESEDAQLIAQSIGQAFSVAYQEFLR


The pepBDB database is updated monthly. Current version: 2020-03-18
huanglab@hust.edu.cn, Lab of Biophysics and Molecular Modeling