PepBDB -- a structural database of biological peptide-mediated interactions

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View the peptide-receptor complex

PDB code: 1AS4
Peptide ID: 1as4_B
Representation:
Peptide: ball and stick
Protein: cartoon

Download files:
receptor.pdb
peptide.pdb
complex.pdb
binding data

Protein style
Protein color Pure
Rainbow
Peptide style
Peptide color Pure
Rainbow
Action
LIGPLOT of 1as4_B peptide binding
interaction

interaction

Interacting peptide residues:
B: 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371, 372, 373, 374, 375, 376, 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389, 390, 391, 392, 393,

Interacting receptor residues:
A: 27, 30, 31, 34, 35, 38, 42, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 99, 103, 112, 188, 189, 190, 194, 207, 208, 209, 210, 216, 217, 218, 220, 229, 238, 240, 241, 243, 244, 246, 247, 248, 249, 250, 251, 252, 253, 254, 255, 256, 257, 260, 263, 264, 267, 272, 273, 276, 281, 282, 283, 284, 285, 286, 287, 288, 289, 291, 292, 293, 294, 338, 340, 345, 347, 348, 349,

Peptide sequence:
>B
GTIVRFNRPFLMIIVPTDTQNIFFMSKVTNPKQ

Receptor sequence(s):
>A
GLASANVDFAFSLYKQLVLKAPDKNVIFSPLSISTALAFLSLGAHNTTLTEILKGLKFNLTETSEAEIHQSFQHLLRTLNQSSDELQLSMGNAMFVKEQL
SLLDRFTEDAKRLYGSEAFATDFQDSAAAKKLINDYVKNGTRGKITDLIKDLDSQTMMVLVNYIFFKAKWEMPFDPQDTHQSRFYLSKKKWVMVPMMSLH
HLTIPYFRDEELSCTVVELKYTGNASALFILPDQDKMEEVEAMLLPETLKRWRDSLEFREIGELYLPKFSISRDYNLNDILLQLGIEEAFTSKADLSGIT
GARNLAVSQVVHKAVLDVFEEGTEASRATAVKITLL


The pepBDB database is updated monthly. Current version: 2020-03-18
huanglab@hust.edu.cn, Lab of Biophysics and Molecular Modeling