PepBDB -- a structural database of biological peptide-mediated interactions

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View the peptide-receptor complex

PDB code: 1AVP
Peptide ID: 1avp_B
Representation:
Peptide: ball and stick
Protein: cartoon

Download files:
receptor.pdb
peptide.pdb
complex.pdb
binding data

Protein style
Protein color Pure
Rainbow
Peptide style
Peptide color Pure
Rainbow
Action
LIGPLOT of 1avp_B peptide binding
interaction

interaction

Interacting peptide residues:
B: 205, 206, 207, 208, 209, 210, 211, 212, 213, 214, 215,

Interacting receptor residues:
A: 70, 77, 88, 89, 92, 93, 96, 97, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 114, 141, 142, 147, 148, 150, 151, 152,

Peptide sequence:
>B
GVQSLKRRRCF

Receptor sequence(s):
>A
MGSSEQELKAIVKDLGCGPYFLGTYDKRFPGFVSPHKLACAIVNTAGRETGGVHWMAFAWNPRSKTCYLFEPFGFSDQRLKQVYQFEYESLLRRSAIASS
PDRCITLEKSTQSVQGPNSAACGLFCCMFLHAFANWPQTPMDHNPTMNLITGVPNSMLNSPQVQPTLRRNQEQLYSFLERHSPYFRSHSAQIRSATSFCH
LKNM


The pepBDB database is updated monthly. Current version: 2020-03-18
huanglab@hust.edu.cn, Lab of Biophysics and Molecular Modeling