PepBDB -- a structural database of biological peptide-mediated interactions

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View the peptide-receptor complex

PDB code: 1B01
Peptide ID: 1b01_A
Representation:
Peptide: ball and stick
Protein: cartoon

Download files:
receptor.pdb
peptide.pdb
complex.pdb
binding data

Protein style
Protein color Pure
Rainbow
Peptide style
Peptide color Pure
Rainbow
Action
LIGPLOT of 1b01_A peptide binding
interaction

interaction

Interacting peptide residues:
A: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 13, 14, 16, 17, 20, 24, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 38, 39, 40, 43,

Interacting receptor residues:
B: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 16, 17, 20, 24, 28, 29, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40,
E: 102, 103, 104, 105, 106, 107, 108, 112, 113, 114, 115, 116, 117,
F: 101, 102, 103, 104, 105, 106, 107, 111, 112, 113, 114, 115, 116,

Peptide sequence:
>A
MKKRLTITLSESVLENLEKMAREMGLSKSAMISVALENYKKGQ

Receptor sequence(s):
>E
CCCGTGCACTCAATGCAAT
>F
GATTGCATTGAGTGCACGG
>B
MKKRLTITLSESVLENLEKMAREMGLSKSAMISVALENYKKGQ


The pepBDB database is updated monthly. Current version: 2020-03-18
huanglab@hust.edu.cn, Lab of Biophysics and Molecular Modeling