PepBDB -- a structural database of biological peptide-mediated interactions

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View the peptide-receptor complex

PDB code: 1B8H
Peptide ID: 1b8h_D
Representation:
Peptide: ball and stick
Protein: cartoon

Download files:
receptor.pdb
peptide.pdb
complex.pdb
binding data

Protein style
Protein color Pure
Rainbow
Peptide style
Peptide color Pure
Rainbow
Action
LIGPLOT of 1b8h_D peptide binding
interaction

interaction

Interacting peptide residues:
D: 893, 894, 895, 896, 897, 898, 899, 900, 901, 902, 903,

Interacting receptor residues:
B: 32, 35, 36, 37, 38, 39, 103, 104, 105, 106, 107, 108, 109, 110, 199, 204, 205, 206, 217, 218, 219, 220, 221, 222,

Peptide sequence:
>D
KKASLFDMFDF

Receptor sequence(s):
>B
MKLSKDTIAILKNFASINSGILLSQGKFIMTRAVNGTTYAEANISDEIDFDVALYDLNSFLSILSLVSDDAEISMHTDGNIKIADTRSTVYWPAADKSTI
VFPNKPIQFPVASVITEIKAEDLQQLLRVSRGLQIDTIAITNKDGKIVINGYNKVEDSGLTRPKYSLTLTDYDGSNNFNFVINMANMKIQPGNYKVMLWG
AGDKVAAKFESSQVSYVIAMEADSTHDF


The pepBDB database is updated monthly. Current version: 2020-03-18
huanglab@hust.edu.cn, Lab of Biophysics and Molecular Modeling