PepBDB -- a structural database of biological peptide-mediated interactions

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View the peptide-receptor complex

PDB code: 1BBR
Peptide ID: 1bbr_F
Representation:
Peptide: ball and stick
Protein: cartoon

Download files:
receptor.pdb
peptide.pdb
complex.pdb
binding data

Protein style
Protein color Pure
Rainbow
Peptide style
Peptide color Pure
Rainbow
Action
LIGPLOT of 1bbr_F peptide binding
interaction

interaction

Interacting peptide residues:
F: 309, 310, 311, 313, 314, 315, 316, 317, 318,

Interacting receptor residues:
E: 173, 174, 189, 190, 191, 192, 193, 194, 195, 213, 214, 215, 216, 217, 219, 220, 226, 227, 228,
H: 42, 57, 60, 96, 97, 98, 99,

Peptide sequence:
>F
DFLAEGGGVR

Receptor sequence(s):
>H
IVEGQDAEVGLSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTVDDLLVRIGKHSRTRYERKVEKISMLDKIYIHPRYNWKENLDRDI
ALLKLKRPIELSDYIHPVCLPDKQTAAKLLHAGFKGRVTGWGNRRETWTT
>E
SVAEVQPSVLQVVNLPLVERPVCKASTRIRITDNMFCAGYKPGEGKRGDACEGDSGGPFVMKSPYNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWI
QKVIDRLGS


The pepBDB database is updated monthly. Current version: 2020-03-18
huanglab@hust.edu.cn, Lab of Biophysics and Molecular Modeling