PepBDB -- a structural database of biological peptide-mediated interactions

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View the peptide-receptor complex

PDB code: 1BCC
Peptide ID: 1bcc_I
Representation:
Peptide: ball and stick
Protein: cartoon

Download files:
receptor.pdb
peptide.pdb
complex.pdb
binding data

Protein style
Protein color Pure
Rainbow
Peptide style
Peptide color Pure
Rainbow
Action
LIGPLOT of 1bcc_I peptide binding
interaction

interaction

Interacting peptide residues:
I: 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 202, 203, 204, 205, 206, 207, 210, 309, 310, 311, 312, 313, 314,

Interacting receptor residues:
A: 64, 65, 76, 80, 84, 85, 86, 87, 146, 279, 280, 281, 282, 283, 284, 285, 305, 306, 307, 360, 363, 364,
B: 70, 71, 74, 95, 96, 97, 98, 99, 100, 101, 146, 147, 150, 151, 153, 154, 156, 160, 176, 177, 284, 285, 325, 367, 371,

Peptide sequence:
>I
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX

Receptor sequence(s):
>A
YAQALQSVPETQVSQLDNGVRVASEQSSQPTCTVGVWIDAGSRYESEKNNGAGYFLEHLAFKGTKNRPQNALEKEVESMGAHLNAYSSREHTAYYIKALS
KDVPKAVELLADIVQNCSLEDSQIEKERDVIVRELQENDTSMREVVFNYLHATAFQGTGLAQSVEGPSENIRKLSRADLTEYLSTHYTAPRMVLAAAGGV
EHQQLLELAQKHFGGVPFTYDDDAVPTLSKCRFTGSQIRHREDGLPLAHVAIAVEGPGWAHPDLVALQVANAIIGHYDRTYGGGLHSSSPLASIAVTNKL
CQSFQTFSICYSETGLFGFYFVCDRMSIDDMMFVLQGQWMRLCTSISESEVLRGKNFLRNALVSHLDGTTPVCEDIGRELLTYGRRIPLEEWEERLAEVD
ARMVREVCSKYIYDQCPAVAGPGPIEQLPDYNRIRSGMFWLR
>B
PPHPQDLEITKLPNGLVIASLENYSPGSTIGVFIKAGSRYENSSNLGTSHLLRLASSLTTKGASSFKITRGIEAVGGKLSVESTRENMAYTVECLRDDVE
ILMEFLLNVTTAPEFRPWEVADLQPQLKIDKAVAFQNPQTHVIENLHAAAYRNALADSLYCPDYRIGKVTSVELHDFVQNHFTSARMALVGLGVSHPVLK
NVAEQLLNIRGGLGLSGAKAKYRGGEIREQNGDSLVHAAIVAESAAIGGAEANAFSVLQHVLGANPHVKRGNPFDVSAFNASYSDSGLFGFYTISQAAYA
GQVIKAAYNQVKTIAQGNVSNENVQAAKNKLKAKYLMSVESSEGFLEEVGSQALAAGSYNPPSTVLQQIDAVADADVIKAAKKFVSRQKSMAASGNLGHT
PFVDEL


The pepBDB database is updated monthly. Current version: 2020-03-18
huanglab@hust.edu.cn, Lab of Biophysics and Molecular Modeling