PepBDB -- a structural database of biological peptide-mediated interactions

Huang lab       Home       Browse      Search      Help & example      Download     

View the peptide-receptor complex

PDB code: 1BCR
Peptide ID: 1bcr_C
Representation:
Peptide: ball and stick
Protein: cartoon

Download files:
receptor.pdb
peptide.pdb
complex.pdb
binding data

Protein style
Protein color Pure
Rainbow
Peptide style
Peptide color Pure
Rainbow
Action
LIGPLOT of 1bcr_C peptide binding
interaction

interaction

Interacting peptide residues:
C: 3, 4,

Interacting receptor residues:
A: 52, 53, 54, 56, 145, 146, 147, 148, 178, 215, 239,
B: 303, 306, 340, 341, 397,

Peptide sequence:
>C
VX

Receptor sequence(s):
>A
HAADRIARLPGQPAVDFDMYSGYITVDEGAGRSLFYLLQEAPEDAQPAPLVLWLNGGPGCSSVAYGASEELGAFRVKPRGAGLVLNEYRWNKVANVLFLD
SPAGVGFSYTNTSSDIYTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLVHRSKNPVINLKGFMVGNGLIDDYHDYVGTFEFWW
NHGIVSDDTYRRLKEACLHDSFIHPSPACDAATDVATAEQGNIDMYSLYTPVCN
>B
SYDPCTERYSTAYYNRRDVQMALHANVTGAMNYTWATCSDTINTHWHDAPRSMLPIYRELIAAGLRIWVFSGDTDAVVPLTATRYSIGALGLPTTTSWYP
WYDDQEVGGWSQVYKGLTLVSVRGAGHEVPLHRPRQALVLFQYFLQGKPMPG


The pepBDB database is updated monthly. Current version: 2020-03-18
huanglab@hust.edu.cn, Lab of Biophysics and Molecular Modeling