PepBDB -- a structural database of biological peptide-mediated interactions

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View the peptide-receptor complex

PDB code: 1RGQ
Peptide ID: 1rgq_C
Representation:
Peptide: ball and stick
Protein: cartoon

Download files:
receptor.pdb
peptide.pdb
complex.pdb
binding data

Protein style
Protein color Pure
Rainbow
Peptide style
Peptide color Pure
Rainbow
Action
LIGPLOT of 1rgq_C peptide binding
interaction

interaction

Interacting peptide residues:
C: 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39,

Interacting receptor residues:
A: 32, 33, 34, 38, 110, 112, 113, 114, 116,
B: 1, 6, 7, 8, 9, 10, 11, 12, 13, 14, 19, 22, 23, 24, 26, 28, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 45, 47, 62, 65, 66, 67, 68, 73, 88, 91, 95, 97, 110, 111, 112, 114, 145, 147,
D: 28, 29, 30, 31, 32, 33, 35,

Peptide sequence:
>C
KGSVVIVGRIVLSGKPAIIPKK

Receptor sequence(s):
>A
QVEGEVQIVSTATQTFLATCINGVCWTVYHGAGTRTIASPKGPVIQMYTNVDQDLVGWPAPQGSRSLTPCTCGSSDLYLVTRHADVIPVRRRGDSRGSLL
SPRPISYLKGSSGGPLLCPAGHAVGLFRAAVCTRGVTKAVDFIPVENLETTMRS
>B
QMGAPITAYAQQTRGLLGCIITSLTGRDKNQVEGEVQIVSTATQTFLATCINGVCWTVYHGAGTRTIASPKGPVIQMYTNVDQDLVGWPAPQGSRSLTPC
TCGSSDLYLVTRHADVIPVRRRGDSRGSLLSPRPISYLKGSSGGPLLCPAGHAVGLFRAAVCTRGVTKAVDFIPVENLETTMRSGS
>D
GSVVIVGRIVLSGKPAI


The pepBDB database is updated monthly. Current version: 2020-03-18
huanglab@hust.edu.cn, Lab of Biophysics and Molecular Modeling